Basic Information
Locus ID:
Cgl08G1769
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 20444379 | 20449445 | + | Cgl08G1769 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 56,962.50 Da | 46.06 | 91.08 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 51 | 185 | 5.4E-21 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 324 | 458 | 4.4E-17 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 301 | 459 | 2.22E-25 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 38 | 186 | 5.76E-29 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 295 | 459 | 3.7E-18 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 18 | 186 | 2.4E-20 | IPR036378 |
| SMART | SM00554 | fasc_3 | 80 | 186 | 3.4E-21 | IPR000782 |
| SMART | SM00554 | fasc_3 | 353 | 459 | 2.6E-16 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 312 | 456 | 18.760303 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 39 | 183 | 21.216328 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 482 | 514 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60490.1 | FASCICLIN-like arabinogalactan-protein 12. | 0 |
| RefSeq | XP_050287159.1 | fasciclin-like arabinogalactan protein 12 [Quercus robur] | 0 |
| Q8LEE9 | Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6A1WM99 | Fasciclin-like arabinogalactan protein 12 OS=Morella rubra OX=262757 GN=CJ030_MR1G014152 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology