Basic Information
Locus ID:
Cgl08G1653
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 18713772 | 18733361 | - | Cgl08G1653 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 131,264.64 Da | 43.80 | 76.40 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02659 | peptidase_C19C | 199 | 527 | 2.61178E-168 | - |
| CDD | cd00121 | MATH | 58 | 181 | 1.25394E-39 | IPR002083 |
| Pfam | PF00917 | MATH domain | 63 | 182 | 7.0E-18 | IPR002083 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 201 | 522 | 5.2E-46 | IPR001394 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 888 | 1096 | 5.0E-56 | IPR029346 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 626 | 878 | 2.3E-79 | IPR024729 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 54 | 189 | 1.64E-42 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 196 | 554 | 7.85E-98 | IPR038765 |
| Gene3D | G3DSA:3.10.20.90 | - | 686 | 803 | 1.2E-45 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 55 | 196 | 5.4E-53 | IPR008974 |
| Gene3D | G3DSA:3.10.20.90 | - | 804 | 901 | 2.5E-29 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 197 | 526 | 4.9E-90 | - |
| SMART | SM00061 | math_3 | 58 | 162 | 1.2E-21 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 56 | 181 | 38.903259 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 201 | 525 | 40.432293 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 441 | 458 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 202 | 217 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| Coils | Coil | Coil | 538 | 566 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_042957719.1 | ubiquitin C-terminal hydrolase 12-like isoform X2 [Carya illinoinensis] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A660KNH1 | ubiquitinyl hydrolase 1 OS=Carpinus fangiana OX=176857 GN=FH972_010482 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology