Basic Information
Locus ID:
Cgl08G1350
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 13286863 | 13291228 | + | Cgl08G1350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 64,527.34 Da | 48.83 | 93.62 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 19 | 123 | 2.66575E-47 | - |
| Pfam | PF00651 | BTB/POZ domain | 27 | 114 | 4.9E-7 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 211 | 449 | 5.1E-78 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 18 | 115 | 9.42E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 12 | 117 | 1.1E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 211 | 448 | 59.372154 | IPR027356 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 449 | 479 | 9.348643 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 12.060652 | IPR000210 |
| Coils | Coil | Coil | 525 | 552 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_021817884.1 | BTB/POZ domain-containing protein At5g03250 [Prunus avium] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6RMA3 | NPH3 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_017567 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology