Basic Information
Locus ID:
Cgl08G1338
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 13078328 | 13080777 | - | Cgl08G1338 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 48,739.28 Da | 37.47 | 87.01 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 269 | 404 | 1.0E-15 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 49 | 183 | 1.1E-19 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 258 | 404 | 1.83E-22 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 33 | 184 | 5.76E-27 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 234 | 404 | 3.4E-17 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 20 | 183 | 2.8E-19 | IPR036378 |
| SMART | SM00554 | fasc_3 | 78 | 184 | 1.1E-23 | IPR000782 |
| SMART | SM00554 | fasc_3 | 298 | 405 | 4.7E-19 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 257 | 402 | 19.288235 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 37 | 181 | 20.619537 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 437 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03170.1 | FASCICLIN-like arabinogalactan-protein 11. | 0 |
| RefSeq | XP_018847793.2 | fasciclin-like arabinogalactan protein 11 [Juglans regia] | 0 |
| Q8LEJ6 | Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2I4GV76 | fasciclin-like arabinogalactan protein 11 OS=Juglans regia OX=51240 GN=LOC109011164 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology