Basic Information
Locus ID:
Cgl08G1313
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Fizzy-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 12869556 | 12870680 | + | Cgl08G1313 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 41,415.21 Da | 36.52 | 77.91 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 314 | 349 | 6.4E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 218 | 258 | 0.0025 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 91 | 154 | 7.5E-7 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 178 | 213 | 1.5E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 44 | 350 | 1.69E-58 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 39 | 353 | 9.3E-116 | IPR015943 |
| SMART | SM00320 | WD40_4 | 133 | 170 | 0.29 | IPR001680 |
| SMART | SM00320 | WD40_4 | 46 | 87 | 320.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 310 | 349 | 7.9E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 90 | 130 | 0.061 | IPR001680 |
| SMART | SM00320 | WD40_4 | 216 | 258 | 3.2E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 174 | 213 | 2.6E-7 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 181 | 213 | 11.022865 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 181 | 222 | 13.816853 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 317 | 350 | 13.449252 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 98 | 139 | 10.274523 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 317 | 350 | 11.154684 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 336 | 350 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_040990294.1 | LOW QUALITY PROTEIN: protein FIZZY-RELATED 2-like [Juglans microcarpa x Juglans regia] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T1NX34 | ANAPC4_WD40 domain-containing protein OS=Carya illinoinensis OX=32201 GN=CIPAW_12G100600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology