Basic Information
Locus ID:
Cgl08G1156
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
E3 ubiquitin-protein ligase RING1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 11187805 | 11190145 | + | Cgl08G1156 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 42,633.57 Da | 71.95 | 64.41 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16669 | RING-H2_RNF181 | 184 | 228 | 1.1135E-23 | - |
| Pfam | PF06547 | Protein of unknown function (DUF1117) | 249 | 359 | 1.7E-39 | IPR010543 |
| Pfam | PF14369 | zinc-ribbon | 7 | 40 | 2.5E-16 | IPR039525 |
| Pfam | PF13639 | Ring finger domain | 183 | 225 | 8.1E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 164 | 232 | 3.06E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 150 | 231 | 2.2E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 184 | 224 | 1.8E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 184 | 225 | 12.282736 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 358 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59550.1 | zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_041026387.1 | E3 ubiquitin-protein ligase RDUF1-like [Juglans microcarpa x Juglans regia] | 0 |
| Q940T5 | E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6RKR6 | RING-type E3 ubiquitin transferase OS=Carpinus fangiana OX=176857 GN=FH972_017344 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology