Basic Information
Locus ID:
Cgl08G1076
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Mitogen-activated protein kinase-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 10431541 | 10438660 | - | Cgl08G1076 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 105,340.88 Da | 45.66 | 76.26 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 115 | 157 | 0.045 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 431 | 461 | 0.06 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 73 | 464 | 5.49E-48 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 333 | 476 | 6.9E-22 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 190 | 332 | 8.1E-21 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 176 | 2.6E-11 | IPR015943 |
| SMART | SM00320 | WD40_4 | 193 | 229 | 7.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 378 | 419 | 6.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 331 | 375 | 2.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 231 | 284 | 0.0073 | IPR001680 |
| SMART | SM00320 | WD40_4 | 422 | 461 | 2.9E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 117 | 157 | 1.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 288 | 327 | 7.0E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 144 | 158 | 8.870959 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 429 | 462 | 10.040596 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 573 | 593 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09080.2 | - | 0 |
| RefSeq | XP_050243829.1 | uncharacterized protein LOC126692311 isoform X1 [Quercus robur] | 0 |
| Q8HXL3 | WD repeat-containing protein 62 OS=Sus scrofa OX=9823 GN=WDR62 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8J4R4G7 | Mitogen-activated protein kinase-binding protein 1 OS=Castanea mollissima OX=60419 GN=CMV_018523 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg14799 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30285450 |
| Apiaceae | Apium graveolens | 1 | Ag5G02363 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G25194 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G09080.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10022253m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g07530.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB07g058390.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1051 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl08G1076, Cgl08G1077 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.1010s00004.v1.0 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.1069 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00006461 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G09988 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1767 |
| Salicaceae | Populus euphratica | 1 | populus_peu11401 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132630690 |
| Solanaceae | Solanum chilense | 1 | SOLCI000172200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107029641 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_4371 |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G1795 |