Basic Information
Locus ID:
Cgl08G1013
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Short Name:
PDC3
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 9877081 | 9880626 | - | Cgl08G1013 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 62,779.18 Da | 38.80 | 90.94 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 20 | 180 | 7.37452E-88 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 378 | 559 | 1.56896E-88 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 16 | 183 | 1.5E-33 | IPR012001 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 424 | 547 | 6.2E-15 | IPR011766 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 213 | 321 | 7.9E-20 | IPR012000 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 16 | 189 | 1.2E-42 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 378 | 570 | 3.4E-42 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 208 | 355 | 1.55E-32 | IPR029035 |
| Gene3D | G3DSA:3.40.50.1220 | - | 203 | 365 | 6.9E-40 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 372 | 558 | 4.1E-56 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 12 | 189 | 9.6E-60 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 10 | 571 | 1.7E-204 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_018825886.1 | pyruvate decarboxylase 1 [Juglans regia] | 0 |
| O82647 | Pyruvate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2I4F2K8 | pyruvate decarboxylase OS=Juglans regia OX=51240 GN=LOC108994918 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology