Basic Information
Locus ID:
Cgl08G1011
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Short Name:
PDC1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 9857304 | 9861197 | - | Cgl08G1011 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 62,952.45 Da | 40.52 | 91.93 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 20 | 180 | 4.40194E-88 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 378 | 559 | 2.21258E-80 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 424 | 543 | 6.8E-14 | IPR011766 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 213 | 322 | 3.5E-19 | IPR012000 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 16 | 183 | 8.5E-34 | IPR012001 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 15 | 189 | 1.95E-43 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 378 | 570 | 3.93E-41 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 208 | 355 | 3.27E-31 | IPR029035 |
| Gene3D | G3DSA:3.40.50.970 | - | 372 | 558 | 1.6E-54 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 12 | 189 | 8.3E-60 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 202 | 365 | 5.0E-39 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 10 | 571 | 1.3E-203 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_018825886.1 | pyruvate decarboxylase 1 [Juglans regia] | 0 |
| O82647 | Pyruvate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2I4F2K8 | pyruvate decarboxylase OS=Juglans regia OX=51240 GN=LOC108994918 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology