Basic Information
Locus ID:
Cgl08G0425
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 3854809 | 3862008 | + | Cgl08G0425 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.47 | 92,343.55 Da | 35.39 | 85.66 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 493 | 757 | 1.1083E-92 | - |
| Pfam | PF12819 | Malectin-like domain | 26 | 377 | 2.0E-33 | IPR024788 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 492 | 756 | 1.7E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 463 | 757 | 8.9E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 456 | 563 | 6.8E-35 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 210 | 379 | 9.5E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 564 | 775 | 3.9E-60 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 23 | 185 | 8.7E-22 | - |
| SMART | SM00220 | serkin_6 | 487 | 760 | 1.3E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 487 | 759 | 35.778114 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 493 | 516 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 608 | 620 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_018832779.1 | receptor-like protein kinase FERONIA [Juglans regia] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4FM91 | receptor-like protein kinase FERONIA OS=Juglans regia OX=51240 GN=LOC109000382 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 6 | Ceq08G0461, Ceq08G0462, Ceq08G0464, Ceq08G0465, Ceq08G0466 ... |
| Casuarinaceae | Casuarina glauca | 6 | Cgl08G0408, Cgl08G0410, Cgl08G0414, Cgl08G0415, Cgl08G0424 ... |