Basic Information
Locus ID:
Cgl08G0308
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 2743782 | 2748084 | - | Cgl08G0308 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 59,120.67 Da | 59.50 | 51.13 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 245 | 301 | 2.1E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 431 | 488 | 6.6E-26 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 239 | 303 | 4.84E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 422 | 490 | 1.96E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 415 | 491 | 5.9E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 229 | 304 | 9.3E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 244 | 302 | 9.5E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 430 | 489 | 8.3E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 245 | 303 | 23.031759 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 425 | 490 | 38.560684 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 252 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_030954365.1 | probable WRKY transcription factor 3 [Quercus lobata] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6QVZ8 | WRKY transcription factor 3 OS=Carpinus fangiana OX=176857 GN=FH972_007602 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology