Basic Information
Locus ID:
Cgl08G0297
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 2596267 | 2597782 | - | Cgl08G0297 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 36,860.51 Da | 31.05 | 101.10 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 70 | 216 | 1.3E-25 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 63 | 276 | 1.28E-46 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 231 | 5.4E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 33 | 139 | 7.1E-21 | - |
| SMART | SM00220 | serkin_6 | 69 | 271 | 4.5E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 69 | 327 | 22.223608 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 182 | 194 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 75 | 97 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16120.1 | wall associated kinase-like 1. wall-associated kinase like | 0 |
| RefSeq | XP_023890745.1 | putative wall-associated receptor kinase-like 16 [Quercus suber] | 0 |
| Q9S9M5 | Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana OX=3702 GN=WAKL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6RKX9 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_018097 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq08G0329, Ceq08G0334 |
| Casuarinaceae | Casuarina glauca | 16 | Cgl02G2034, Cgl08G0268, Cgl08G0269, Cgl08G0271, Cgl08G0274 ... |