Basic Information
Locus ID:
Cgl08G0277
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Short Name:
CCT3
Description:
T-complex protein 1 subunit
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 2343243 | 2344357 | - | Cgl08G0277 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.96 | 28,920.74 Da | 33.41 | 107.55 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 104 | 252 | 1.2E-30 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 85 | 252 | 3.28E-50 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 72 | 177 | 3.7E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 178 | 253 | 1.5E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 102 | 253 | 27.7076 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 108 | 130 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16120.1 | wall associated kinase-like 1. wall-associated kinase like | 0 |
| RefSeq | XP_018830520.2 | putative wall-associated receptor kinase-like 16 [Juglans regia] | 0 |
| Q9S9M5 | Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana OX=3702 GN=WAKL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2I4FFT8 | putative wall-associated receptor kinase-like 16 OS=Juglans regia OX=51240 GN=LOC108998423 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq08G0329, Ceq08G0334 |
| Casuarinaceae | Casuarina glauca | 16 | Cgl02G2034, Cgl08G0268, Cgl08G0269, Cgl08G0271, Cgl08G0274 ... |