Basic Information
Locus ID:
Cgl08G0067
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Short Name:
AFB3
Description:
Protein AUXIN SIGNALING F-BOX
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 449532 | 452396 | + | Cgl08G0067 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 62,174.86 Da | 44.59 | 99.93 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF18791 | Transport inhibitor response 1 protein domain | 61 | 107 | 3.1E-13 | IPR041101 |
| Pfam | PF18511 | F-box | 2 | 41 | 3.5E-19 | IPR041567 |
| SUPERFAMILY | SSF52047 | RNI-like | 16 | 485 | 1.81E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 279 | 528 | 1.5E-64 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 278 | 1.1E-61 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 40 | 1.4E-17 | - |
| SMART | SM00256 | fbox_2 | 4 | 45 | 6.1E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 438 | 462 | 26.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 389 | 412 | 370.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 178 | 204 | 380.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 296 | 328 | 120.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 124 | 149 | 14.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 329 | 353 | 6.9 | IPR006553 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26810.1 | auxin signaling F-box 2. | 0 |
| RefSeq | XP_041003691.1 | protein AUXIN SIGNALING F-BOX 2 [Juglans microcarpa x Juglans regia] | 0 |
| Q9LW29 | Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana OX=3702 GN=AFB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QXJ2 | F-box domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_007181 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology