Basic Information
Locus ID:
Cgl08G0064
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Short Name:
AFB3
Description:
Protein AUXIN SIGNALING F-BOX
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 435417 | 438753 | + | Cgl08G0064 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 62,224.87 Da | 41.09 | 97.48 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF18791 | Transport inhibitor response 1 protein domain | 61 | 107 | 7.4E-24 | IPR041101 |
| Pfam | PF18511 | F-box | 2 | 41 | 8.0E-21 | IPR041567 |
| Pfam | PF13516 | Leucine Rich repeat | 149 | 165 | 0.4 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 16 | 509 | 1.24E-32 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 40 | 1.8E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 551 | 1.2E-162 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 345 | 369 | 2.8 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 454 | 479 | 110.0 | IPR006553 |
| SMART | SM00256 | fbox_2 | 4 | 45 | 1.7E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 405 | 428 | 240.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 124 | 149 | 16.0 | IPR006553 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26810.1 | auxin signaling F-box 2. | 0 |
| RefSeq | XP_041007062.1 | protein AUXIN SIGNALING F-BOX 2-like [Juglans microcarpa x Juglans regia] | 0 |
| Q9LW29 | Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana OX=3702 GN=AFB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QXJ2 | F-box domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_007181 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology