Basic Information
Locus ID:
Cgl08G0041
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 295154 | 317340 | + | Cgl08G0041 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 225,180.27 Da | 37.98 | 83.86 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 1053 | 1294 | 5.18726E-141 | - |
| CDD | cd10810 | GH38N_AMII_LAM_like | 51 | 326 | 5.39519E-176 | - |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 610 | 825 | 2.3E-49 | IPR011682 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 1583 | 1797 | 1.4E-47 | IPR011682 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 368 | 460 | 5.8E-20 | IPR015341 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 1880 | 1987 | 3.4E-11 | IPR041147 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 907 | 1012 | 1.1E-8 | IPR041147 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 1106 | 1330 | 8.4E-57 | IPR000602 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 1054 | 1105 | 4.0E-9 | IPR000602 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 1335 | 1427 | 3.2E-22 | IPR015341 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 52 | 363 | 2.7E-92 | IPR000602 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 1042 | 1331 | 1.11E-83 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 1335 | 1433 | 1.41E-28 | IPR028995 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 1438 | 1990 | 1.48E-142 | IPR011013 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 462 | 1016 | 9.89E-143 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 367 | 460 | 2.35E-27 | IPR028995 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 40 | 366 | 2.0E-107 | IPR011330 |
| Gene3D | G3DSA:2.70.98.30 | - | 607 | 873 | 2.9E-94 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 332 | 410 | 6.8E-30 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 1299 | 1377 | 6.2E-30 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 1581 | 1846 | 1.6E-92 | - |
| Gene3D | G3DSA:2.60.40.1360 | - | 894 | 1020 | 9.6E-33 | - |
| Gene3D | G3DSA:2.60.40.1360 | - | 1866 | 1992 | 2.4E-35 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 1053 | 1105 | 4.4E-17 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 411 | 466 | 5.3E-21 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 1378 | 1434 | 5.1E-22 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1180 | - | 1456 | 1580 | 6.9E-25 | IPR013780 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 51 | 331 | 5.7E-121 | IPR027291 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 1106 | 1298 | 2.7E-73 | IPR027291 |
| Gene3D | G3DSA:2.60.40.1180 | - | 481 | 606 | 1.4E-29 | IPR013780 |
| SMART | SM00872 | Alpha_mann_mid_2 | 1335 | 1409 | 5.7E-24 | IPR015341 |
| SMART | SM00872 | Alpha_mann_mid_2 | 368 | 442 | 8.4E-22 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_018834052.1 | alpha-mannosidase At3g26720-like [Juglans regia] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HDU9 | alpha-mannosidase OS=Acer yangbiense OX=1000413 GN=EZV62_020204 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology