Basic Information
Locus ID:
Cgl07G2451
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
C1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 28071711 | 28074098 | - | Cgl07G2451 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 34,830.67 Da | 57.51 | 79.57 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03107 | C1 domain | 66 | 111 | 6.6E-6 | IPR004146 |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 87 | 176 | 5.75E-12 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 151 | 235 | 8.16E-9 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 18 | 52 | 7.95E-5 | - |
| SMART | SM00109 | c1_12 | 191 | 236 | 0.36 | IPR002219 |
| SMART | SM00109 | c1_12 | 8 | 55 | 0.11 | IPR002219 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28460.1 | Cysteine/Histidine-rich C1 domain family protein. | 0 |
| RefSeq | XP_042943506.1 | uncharacterized protein LOC122277554 isoform X2 [Carya illinoinensis] | 0 |
| TrEMBL | A0A2I4GYD7 | uncharacterized protein LOC109011949 OS=Juglans regia OX=51240 GN=LOC109011949 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq07G2182, Ceq07G2183, Ceq07G2184 |
| Casuarinaceae | Casuarina glauca | 8 | Cgl01G1990, Cgl04G0671, Cgl04G0734, Cgl07G2393, Cgl07G2398 ... |