HalophFGD

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Basic Information
Locus ID: Cgl07G2448
Species & Taxonomic ID: Casuarina glauca & 3522
Genome Assembly: GCA_028551395.1
Description: Cysteine Histidine-rich C1 domain family protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr07 28012914 28015446 - Cgl07G2448
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.60 31,055.68 Da 53.80 83.99 -0.23
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03107 C1 domain 96 141 7.1E-7 IPR004146
Pfam PF03107 C1 domain 152 195 4.1E-7 IPR004146
SUPERFAMILY SSF57889 Cysteine-rich domain 31 85 4.36E-6 -
SUPERFAMILY SSF57889 Cysteine-rich domain 117 200 3.09E-15 -
Best hit
Source Best Hit ID Description E-value
TAIR AT5G37210.1 Cysteine/Histidine-rich C1 domain family protein. 0
RefSeq XP_030958352.1 uncharacterized protein LOC115980217 [Quercus lobata] 0
TrEMBL A0A1J3CQT2 Phorbol-ester/DAG-type domain-containing protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR20110_c1_g1_i1_g.67214 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Casuarinaceae Casuarina equisetifolia 3 Ceq07G2182, Ceq07G2183, Ceq07G2184
Casuarinaceae Casuarina glauca 8 Cgl01G1990, Cgl04G0671, Cgl04G0734, Cgl07G2393, Cgl07G2398 ...
Cgl07G2446, Cgl07G2448, Cgl07G2451
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.