Basic Information
Locus ID:
Cgl07G2446
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 27984422 | 27986035 | - | Cgl07G2446 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 43,622.07 Da | 56.42 | 83.56 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03107 | C1 domain | 122 | 165 | 3.1E-7 | IPR004146 |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 272 | 341 | 2.49E-9 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 16 | 55 | 5.68E-6 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 86 | 171 | 3.0E-15 | - |
| Coils | Coil | Coil | 374 | 374 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_041011236.1 | uncharacterized protein LOC121255004 [Juglans microcarpa x Juglans regia] | 0 |
| TrEMBL | A0A6A1WUR8 | Phorbol-ester/DAG-type domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR1G028871 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq07G2182, Ceq07G2183, Ceq07G2184 |
| Casuarinaceae | Casuarina glauca | 8 | Cgl01G1990, Cgl04G0671, Cgl04G0734, Cgl07G2393, Cgl07G2398 ... |