Basic Information
Locus ID:
Cgl07G2398
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 27442302 | 27445476 | + | Cgl07G2398 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 108,194.86 Da | 56.65 | 80.28 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03107 | C1 domain | 324 | 368 | 1.1E-6 | IPR004146 |
| Pfam | PF03107 | C1 domain | 139 | 182 | 1.0E-6 | IPR004146 |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 604 | 683 | 8.37E-9 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 34 | 68 | 3.14E-5 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 715 | 801 | 2.27E-13 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 475 | 561 | 4.4E-10 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 289 | 375 | 1.78E-14 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 103 | 188 | 6.28E-15 | - |
| SMART | SM00355 | c2h2final6 | 484 | 508 | 73.0 | IPR013087 |
| SMART | SM00355 | c2h2final6 | 298 | 322 | 17.0 | IPR013087 |
| SMART | SM00355 | c2h2final6 | 112 | 136 | 16.0 | IPR013087 |
| SMART | SM00109 | c1_12 | 576 | 623 | 0.28 | IPR002219 |
| SMART | SM00249 | PHD_3 | 285 | 345 | 18.0 | IPR001965 |
| SMART | SM00249 | PHD_3 | 590 | 654 | 7.4 | IPR001965 |
| SMART | SM00249 | PHD_3 | 37 | 85 | 25.0 | IPR001965 |
| SMART | SM00249 | PHD_3 | 471 | 530 | 7.1 | IPR001965 |
| SMART | SM00109 | c1_12 | 746 | 793 | 1.9 | IPR002219 |
| SMART | SM00109 | c1_12 | 210 | 254 | 0.45 | IPR002219 |
| SMART | SM00109 | c1_12 | 810 | 852 | 3.4 | IPR002219 |
| SMART | SM00109 | c1_12 | 396 | 441 | 3.8 | IPR002219 |
| SMART | SM00109 | c1_12 | 25 | 70 | 0.12 | IPR002219 |
| SMART | SM00249 | PHD_3 | 760 | 824 | 3.2 | IPR001965 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26250.1 | Cysteine/Histidine-rich C1 domain family protein. | 0 |
| RefSeq | XP_006468700.2 | uncharacterized protein LOC102618382 [Citrus sinensis] | 0 |
| TrEMBL | A0A067GNH7 | Phorbol-ester/DAG-type domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g045873mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq07G2182, Ceq07G2183, Ceq07G2184 |
| Casuarinaceae | Casuarina glauca | 8 | Cgl01G1990, Cgl04G0671, Cgl04G0734, Cgl07G2393, Cgl07G2398 ... |