Basic Information
Locus ID:
Cgl07G2393
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Cysteine Histidine-rich C1 domain family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 27355578 | 27359589 | + | Cgl07G2393 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 144,707.69 Da | 53.95 | 76.69 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03107 | C1 domain | 758 | 803 | 2.7E-6 | IPR004146 |
| Pfam | PF03107 | C1 domain | 962 | 1016 | 9.7E-7 | IPR004146 |
| Pfam | PF03107 | C1 domain | 337 | 384 | 9.9E-7 | IPR004146 |
| Pfam | PF03107 | C1 domain | 700 | 746 | 3.5E-6 | IPR004146 |
| Pfam | PF03107 | C1 domain | 1139 | 1187 | 1.2E-7 | IPR004146 |
| Pfam | PF03107 | C1 domain | 208 | 252 | 7.7E-6 | IPR004146 |
| Pfam | PF03107 | C1 domain | 865 | 917 | 5.2E-6 | IPR004146 |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 104 | 136 | 4.71E-5 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 173 | 259 | 3.49E-14 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 424 | 506 | 2.39E-7 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 1110 | 1189 | 2.3E-15 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 953 | 1025 | 6.8E-8 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 359 | 443 | 2.77E-12 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 722 | 810 | 8.27E-14 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 785 | 867 | 3.77E-15 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 538 | 626 | 1.53E-11 | - |
| SMART | SM00355 | c2h2final6 | 368 | 392 | 26.0 | IPR013087 |
| SMART | SM00355 | c2h2final6 | 547 | 571 | 39.0 | IPR013087 |
| SMART | SM00355 | c2h2final6 | 842 | 857 | 310.0 | IPR013087 |
| SMART | SM00355 | c2h2final6 | 182 | 206 | 29.0 | IPR013087 |
| SMART | SM00249 | PHD_3 | 355 | 414 | 3.4 | IPR001965 |
| SMART | SM00109 | c1_12 | 94 | 139 | 0.19 | IPR002219 |
| SMART | SM00109 | c1_12 | 973 | 1021 | 0.78 | IPR002219 |
| SMART | SM00109 | c1_12 | 876 | 924 | 2.2 | IPR002219 |
| SMART | SM00109 | c1_12 | 460 | 507 | 0.52 | IPR002219 |
| SMART | SM00109 | c1_12 | 817 | 861 | 2.4 | IPR002219 |
| SMART | SM00249 | PHD_3 | 1158 | 1233 | 5.8 | IPR001965 |
| SMART | SM00249 | PHD_3 | 534 | 594 | 3.1 | IPR001965 |
| SMART | SM00249 | PHD_3 | 987 | 1052 | 21.0 | IPR001965 |
| SMART | SM00249 | PHD_3 | 718 | 778 | 4.8 | IPR001965 |
| SMART | SM00109 | c1_12 | 643 | 688 | 0.58 | IPR002219 |
| SMART | SM00249 | PHD_3 | 829 | 893 | 0.39 | IPR001965 |
| SMART | SM00249 | PHD_3 | 169 | 229 | 5.3 | IPR001965 |
| ProSiteProfiles | PS50081 | Zinc finger phorbol-ester/DAG-type profile. | 869 | 924 | 8.029301 | IPR002219 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G11385.1 | Cysteine/Histidine-rich C1 domain family protein. | 0 |
| RefSeq | XP_042943504.1 | uncharacterized protein LOC122277554 isoform X1 [Carya illinoinensis] | 0 |
| TrEMBL | A0A8T1PFL2 | Phorbol-ester/DAG-type domain-containing protein OS=Carya illinoinensis OX=32201 GN=CIPAW_09G029900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq07G2182, Ceq07G2183, Ceq07G2184 |
| Casuarinaceae | Casuarina glauca | 8 | Cgl01G1990, Cgl04G0671, Cgl04G0734, Cgl07G2393, Cgl07G2398 ... |