HalophFGD

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Basic Information
Locus ID: Cgl07G1982
Species & Taxonomic ID: Casuarina glauca & 3522
Genome Assembly: GCA_028551395.1
Description: Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
Chromosome Start End Strand ID
chr07 21333769 21338322 + Cgl07G1982
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.43 77,551.32 Da 52.81 80.06 -0.47
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd06429 GT8_like_1 366 663 1.74988E-122 -
Pfam PF01501 Glycosyl transferase family 8 338 649 1.0E-90 IPR002495
SUPERFAMILY SSF53448 Nucleotide-diphospho-sugar transferases 366 672 3.66E-68 IPR029044
Gene3D G3DSA:3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 370 668 1.7E-44 IPR029044
MobiDBLite mobidb-lite consensus disorder prediction 160 181 - -
Gene Ontology
Molecular Function:
GO:0016757 (glycosyltransferase activity)
KEGG Pathway
KO Term:
K13648 (alpha-1,4-galacturonosyltransferase [EC:2.4.1.43])
Pathway:
ko00520 (Amino sugar and nucleotide sugar metabolism) map00520 (Amino sugar and nucleotide sugar metabolism)
Reaction:
R05191 (n UDP-D-galacturonate <=> n UDP + Pectin)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G38270.2 galacturonosyltransferase 3. Encodes a protein with putative galacturonosyltransferase activity. 0
RefSeq XP_042985580.1 probable galacturonosyltransferase 3 isoform X2 [Carya illinoinensis] 0
Swiss-Prot Q0WQD2 Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GAUT3 PE=2 SV=2 0
TrEMBL A0A5N6QSA6 Hexosyltransferase OS=Carpinus fangiana OX=176857 GN=FH972_005360 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 5 jg11851, jg21753, jg24728, jg38531, jg5793
Aizoaceae Mesembryanthemum crystallinum 2 gene_1376, gene_7383
Amaranthaceae Atriplex hortensis 3 Ah009388, Ah017237, Ah023114
Amaranthaceae Beta vulgaris 2 BVRB_8g184210, BVRB_9g212470
Amaranthaceae Salicornia bigelovii 7 Sbi_jg10912, Sbi_jg10914, Sbi_jg25778, Sbi_jg4385 ...
Sbi_jg47422, Sbi_jg49300, Sbi_jg9605
Amaranthaceae Salicornia europaea 4 Seu_jg19038, Seu_jg21664, Seu_jg21665, Seu_jg5806
Amaranthaceae Suaeda aralocaspica 3 GOSA_00000340, GOSA_00012461, GOSA_00018757
Amaranthaceae Suaeda glauca 6 Sgl11211, Sgl16606, Sgl41771, Sgl46571, Sgl55604, Sgl60818
Amaranthaceae Chenopodium album 9 gene:ENSEOMG00000008981, gene:ENSEOMG00000016275 ...
gene:ENSEOMG00000016387, gene:ENSEOMG00000030257, gene:ENSEOMG00000033053, gene:ENSEOMG00000036783, gene:ENSEOMG00000045706, gene:ENSEOMG00000047046, gene:ENSEOMG00000051576
Amaranthaceae Chenopodium quinoa 6 CQ.Regalona.r1.1AG0005700, CQ.Regalona.r1.2BG0023960 ...
CQ.Regalona.r1.5AG0027880, CQ.Regalona.r1.7BG0001710, CQ.Regalona.r1.8BG0000060, CQ.Regalona.r1.9AG0001460
Anacardiaceae Pistacia vera 4 pistato.v30003430, pistato.v30025850, pistato.v30066330 ...
pistato.v30108770
Apiaceae Apium graveolens 3 Ag10G00267, Ag1G01711, Ag5G01116
Arecaceae Cocos nucifera 7 COCNU_01G013080, COCNU_07G008710, COCNU_09G000910 ...
COCNU_11G011170, scaffold000650G000020, scaffold016239G000100, scaffold045783G000010
Arecaceae Phoenix dactylifera 9 gene-LOC103696144, gene-LOC103696960, gene-LOC103701120 ...
gene-LOC103701177, gene-LOC103702363, gene-LOC103702796, gene-LOC103710668, gene-LOC103720912, gene-LOC103720921
Asparagaceae Asparagus officinalis 8 AsparagusV1_01.1144.V1.1, AsparagusV1_01.1145.V1.1 ...
AsparagusV1_01.3287.V1.1, AsparagusV1_01.512.V1.1, AsparagusV1_04.1381.V1.1, AsparagusV1_04.600.V1.1, AsparagusV1_05.2164.V1.1, AsparagusV1_05.734.V1.1
Asteraceae Flaveria trinervia 6 Ftri11G26352, Ftri13G02954, Ftri5G18793, Ftri7G22982 ...
FtriNA19628, FtriNA24316
Brassicaceae Arabidopsis thaliana 4 AT2G46480.1, AT3G61130.1, AT4G38270.1, AT5G47780.1
Brassicaceae Eutrema salsugineum 3 Thhalv10000819m.g.v1.0, Thhalv10005820m.g.v1.0 ...
Thhalv10024734m.g.v1.0
Brassicaceae Schrenkiella parvula 4 Sp2g12520.v2.2, Sp4g28480.v2.2, Sp5g02250.v2.2 ...
Sp7g37450.v2.2
Brassicaceae Brassica nigra 6 BniB02g064450.2N, BniB02g089750.2N, BniB04g009990.2N ...
BniB06g062190.2N, BniB08g075230.2N, BniS06172g250.2N
Casuarinaceae Casuarina equisetifolia 3 Ceq02G0452, Ceq02G1435, Ceq07G1819
Casuarinaceae Casuarina glauca 5 Cgl02G0481, Cgl02G1479, Cgl07G1975, Cgl07G1982, Cgl07G2023
Cymodoceaceae Cymodocea nodosa 5 gene.Cymno01g04630, gene.Cymno02g10290, gene.Cymno06g09670 ...
gene.Cymno14g07660, gene.Cymno18g02790
Hydrocharitaceae Thalassia testudinum 5 gene.Thate02g03430, gene.Thate02g03440, gene.Thate05g09190 ...
gene.Thate06g06710, gene.Thate09g19100
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-3602, nbisL1-mrna-7766
Nitrariaceae Nitraria sibirica 3 evm.TU.LG04.982, evm.TU.LG08.425, evm.TU.LG12.1305
Plantaginaceae Plantago ovata 3 Pov_00006118, Pov_00007056, Pov_00027481
Plumbaginaceae Limonium bicolor 3 Lb2G10516, Lb4G21745, Lb4G22952
Poaceae Echinochloa crus-galli 17 AH01.990, AH03.2339, AH03.2713, AH06.3035, AH08.1105 ...
AH08.1932, BH03.2470, BH03.2856, BH06.2822, BH08.1097, BH08.2025, CH01.1181, CH03.2664, CH03.3062, CH08.1208, CH08.2203, Contig181.188
Poaceae Eleusine coracana subsp. coracana 10 gene-QOZ80_3AG0220960, gene-QOZ80_3BG0266120 ...
gene-QOZ80_6AG0528440, gene-QOZ80_6AG0539030, gene-QOZ80_6AG0551370, gene-QOZ80_6BG0482450, gene-QOZ80_6BG0492360, gene-QOZ80_6BG0504960, gene-QOZ80_8AG0625950, gene-QOZ80_8BG0653990
Poaceae Hordeum vulgare 6 HORVU.MOREX.r3.1HG0083170.1, HORVU.MOREX.r3.4HG0334870.1 ...
HORVU.MOREX.r3.5HG0489550.1, HORVU.MOREX.r3.5HG0498770.1, HORVU.MOREX.r3.7HG0677820.1, HORVU.MOREX.r3.7HG0751510.1
Poaceae Lolium multiflorum 9 gene-QYE76_006047, gene-QYE76_006813, gene-QYE76_012642 ...
gene-QYE76_024741, gene-QYE76_029813, gene-QYE76_037006, gene-QYE76_037081, gene-QYE76_062569, gene-QYE76_062571
Poaceae Oryza coarctata 12 Oco11G017080, Oco12G017270, Oco12G017880, Oco15G006290 ...
Oco15G011830, Oco16G006130, Oco16G010740, Oco17G007490, Oco17G010220, Oco18G007780, Oco18G010200, Oco19G002830
Poaceae Oryza sativa 8 LOC_Os06g49810.1, LOC_Os06g51160.1, LOC_Os08g23780.1 ...
LOC_Os08g38740.1, LOC_Os09g30280.1, LOC_Os09g36180.1, LOC_Os09g36190.1, LOC_Os10g21890.2
Poaceae Paspalum vaginatum 6 gene-BS78_01G120600, gene-BS78_02G219200 ...
gene-BS78_02G252500, gene-BS78_07G176500, gene-BS78_10G185900, gene-BS78_10G216500
Poaceae Puccinellia tenuiflora 10 Pt_Chr0104938, Pt_Chr0203653, Pt_Chr0206882, Pt_Chr0207175 ...
Pt_Chr0401854, Pt_Chr0404015, Pt_Chr0700005, Pt_Chr0700993, Pt_Chr0701642, Pt_Chr0701673
Poaceae Sporobolus alterniflorus 14 Chr01G008040, Chr0G007290, Chr0G021810, Chr10G007770 ...
Chr10G022450, Chr12G029350, Chr14G010370, Chr14G015950, Chr14G015960, Chr14G015970, Chr16G012540, Chr17G011860, Chr21G010510, Chr21G014990
Poaceae Thinopyrum elongatum 7 Tel1E01G605700, Tel4E01G056800, Tel5E01G410300 ...
Tel5E01G508500, Tel7E01G424000, Tel7E01G956900, Tel7E01G957700
Poaceae Triticum dicoccoides 12 gene_TRIDC1AG054490, gene_TRIDC1BG062360 ...
gene_TRIDC4AG043890, gene_TRIDC4BG004900, gene_TRIDC4BG020170, gene_TRIDC5AG040030, gene_TRIDC5AG047340, gene_TRIDC5BG042430, gene_TRIDC5BG051060, gene_TRIDC7AG030510, gene_TRIDC7AG076420, gene_TRIDC7BG021400
Poaceae Triticum aestivum 18 TraesCS1A02G370800.2, TraesCS1B02G390000.1 ...
TraesCS1D02G376900.2, TraesCS4A02G283700.1, TraesCS4B02G029400.1, TraesCS4D02G026900.1, TraesCS5A02G256400.1, TraesCS5A02G319800.1, TraesCS5B02G255700.1, TraesCS5B02G320100.2, TraesCS5D02G264700.1, TraesCS5D02G325800.2, TraesCS7A02G239100.1, TraesCS7A02G550200.1, TraesCS7B02G134900.2, TraesCS7B02G473600.1, TraesCS7D02G237000.1, TraesCSU02G105800.2
Poaceae Zea mays 8 Zm00001eb053500_P001, Zm00001eb101530_P002 ...
Zm00001eb103470_P001, Zm00001eb170740_P001, Zm00001eb217140_P002, Zm00001eb228580_P003, Zm00001eb239160_P001, Zm00001eb319550_P001
Poaceae Zoysia japonica 3 nbis-gene-3390, nbis-gene-35292, nbis-gene-46575
Poaceae Zoysia macrostachya 4 Zma_g3043, Zma_g32212, Zma_g32751, Zma_g33448
Portulacaceae Portulaca oleracea 9 evm.TU.LG01.2036, evm.TU.LG04.1919, evm.TU.LG04.2367 ...
evm.TU.LG06.418, evm.TU.LG07.1556, evm.TU.LG14.1217, evm.TU.LG15.1697, evm.TU.LG19.1197, evm.TU.LG24.1201
Posidoniaceae Posidonia oceanica 4 gene.Posoc02g11470, gene.Posoc02g11480, gene.Posoc03g09130 ...
gene.Posoc07g07320
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_2_RagTag.26, evm.TU.Scaffold_5_RagTag.343 ...
evm.TU.Scaffold_7_RagTag.1414
Rhizophoraceae Carallia pectinifolia 6 nbisL1-mrna-10914, nbisL1-mrna-20, nbisL1-mrna-20079 ...
nbisL1-mrna-20212, nbisL1-mrna-53, nbisL1-mrna-9907
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-13551, nbisL1-mrna-15725, nbisL1-mrna-4756
Rhizophoraceae Ceriops zippeliana 5 nbisL1-mrna-10472, nbisL1-mrna-13361, nbisL1-mrna-7121 ...
nbisL1-mrna-7122, nbisL1-mrna-9296
Rhizophoraceae Kandelia candel 4 evm.TU.utg000002l.240, evm.TU.utg000006l.528 ...
evm.TU.utg000009l.1223, evm.TU.utg000018l.759
Rhizophoraceae Kandelia obovata 4 Maker00003509, Maker00005482, Maker00011722, Maker00013386
Rhizophoraceae Rhizophora apiculata 4 nbisL1-mrna-14079, nbisL1-mrna-3242, nbisL1-mrna-9062 ...
nbisL1-mrna-9241
Rhizophoraceae Rhizophora mangle 4 nbisL1-mrna-11251, nbisL1-mrna-12100, nbisL1-mrna-24141 ...
nbisL1-mrna-6971
Salicaceae Populus euphratica 6 populus_peu08426, populus_peu10498, populus_peu16911 ...
populus_peu26567, populus_peu27806, populus_peu31744
Solanaceae Lycium barbarum 4 gene-LOC132599398, gene-LOC132616213, gene-LOC132632977 ...
gene-LOC132645634
Solanaceae Solanum chilense 4 SOLCI002559700, SOLCI003417600, SOLCI004079300 ...
SOLCI005586000
Solanaceae Solanum pennellii 4 gene-LOC107002634, gene-LOC107006505, gene-LOC107007965 ...
gene-LOC107017714
Tamaricaceae Reaumuria soongarica 4 STRG.29206_chr11_+, STRG.8587_chr06_-, gene_11360, gene_2413
Tamaricaceae Tamarix chinensis 4 TC03G2722, TC08G0010, TC09G2127, TC12G0838
Zosteraceae Zostera marina 5 Zosma02g06360.v3.1, Zosma04g21470.v3.1, Zosma05g21800.v3.1 ...
Zosma05g23600.v3.1, Zosma06g05150.v3.1
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