halophFGD

Basic Information

Locus ID: Cgl07G1695

Species & Taxonomic ID: Casuarina glauca & 3522

Genome Assembly: GCA_028551395.1

Description: 3-ketoacyl-CoA synthase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr07	18382316	18390888	-	Cgl07G1695

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.46	98,482.68 Da	42.00	87.06	-0.24

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00831	CHS_like	494	846	1.6054E-111	-
Pfam	PF08392	FAE1/Type III polyketide synthase-like protein	478	747	6.3E-109	IPR013601
Pfam	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal	766	847	1.1E-10	IPR013747
SUPERFAMILY	SSF53901	Thiolase-like	483	670	1.83E-38	IPR016039
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	241	481	2.75E-13	IPR011009
SUPERFAMILY	SSF53901	Thiolase-like	676	848	3.97E-33	IPR016039
Gene3D	G3DSA:3.40.47.10	-	439	848	1.5E-65	IPR016039
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	218	381	9.2E-14	-
MobiDBLite	mobidb-lite	consensus disorder prediction	173	193	-	-

Gene Ontology

Biological Process:

GO:0006633 (fatty acid biosynthetic process)

Molecular Function:

Cellular Component:

GO:0016020 (membrane)

KEGG Pathway

KO Term:

K15397 (3-ketoacyl-CoA synthase [EC:2.3.1.199])

Pathway:

ko00062 (Fatty acid elongation) map00062 (Fatty acid elongation) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Module:

M00415 (Fatty acid elongation in endoplasmic reticulum)

Reaction:

R09419 (Malonyl-CoA + Acyl-CoA <=> 3-Oxoacyl-CoA + CoA + CO2) R10825 (Very-long-chain acyl-CoA + Malonyl-CoA <=> Very-long-chain 3-oxoacyl-CoA + CO2 + CoA)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G71160.1	3-ketoacyl-CoA synthase 7. Encodes KCS7, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
RefSeq	XP_050256801.1	3-ketoacyl-CoA synthase 7 [Quercus robur]
Swiss-Prot	Q9C992	3-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana OX=3702 GN=KCS7 PE=2 SV=1
TrEMBL	A0A5J5BRB8	very-long-chain 3-oxoacyl-CoA synthase OS=Nyssa sinensis OX=561372 GN=F0562_020309 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Anacardiaceae	Pistacia vera	1	pistato.v30103160
Apiaceae	Apium graveolens	1	Ag1G00747
Asteraceae	Flaveria trinervia	1	Ftri14G27931
Casuarinaceae	Casuarina equisetifolia	1	Ceq07G1580
Casuarinaceae	Casuarina glauca	1	Cgl07G1695