Basic Information
Locus ID:
Cgl07G1581
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 16701525 | 16707570 | + | Cgl07G1581 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 41,279.28 Da | 42.87 | 79.46 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 309 | 357 | 5.7E-10 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 267 | 359 | 2.49E-16 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 47 | 258 | 1.74E-23 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 291 | 369 | 6.1E-15 | - |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 47 | 267 | 3.3E-10 | IPR027267 |
| SMART | SM00326 | SH3_2 | 305 | 360 | 2.4E-12 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 302 | 361 | 19.446272 | IPR001452 |
| Coils | Coil | Coil | 220 | 240 | - | - |
| Coils | Coil | Coil | 193 | 213 | - | - |
| Coils | Coil | Coil | 149 | 176 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_030944581.1 | SH3 domain-containing protein 2 [Quercus lobata] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QN64 | SH3 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_005094 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology