Basic Information
Locus ID:
Cgl07G1569
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 16609007 | 16613050 | - | Cgl07G1569 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 43,586.42 Da | 58.19 | 73.73 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 79 | 250 | 2.8E-80 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 175 | 248 | 2.3E-34 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 72 | 173 | 1.6E-44 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 379 | - | - |
| Coils | Coil | Coil | 382 | 389 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.3 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_018815358.1 | ubiquitin fusion degradation protein 1 homolog [Juglans regia] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2I4E7H7 | ubiquitin fusion degradation protein 1 homolog OS=Juglans regia OX=51240 GN=LOC108986990 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology