halophFGD

Basic Information

Locus ID: Cgl07G1489

Species & Taxonomic ID: Casuarina glauca & 3522

Genome Assembly: GCA_028551395.1

Description: Cell division cycle 20.2, cofactor of APC complex-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr07	15442497	15446987	-	Cgl07G1489

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.40	20,328.82 Da	44.32	83.48	-0.30

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF50978	WD40 repeat-like	7	47	4.21E-7	IPR036322
Gene3D	G3DSA:2.130.10.10	-	1	77	1.0E-7	IPR015943
SMART	SM00320	WD40_4	2	41	3.6E-4	IPR001680
ProSiteProfiles	PS50294	Trp-Asp (WD) repeats circular profile.	9	41	9.99469	-
ProSiteProfiles	PS50082	Trp-Asp (WD) repeats profile.	9	41	11.978851	IPR001680

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K03363 (cell division cycle 20, cofactor of APC complex)

Pathway:

ko04110 (Cell cycle) map04110 (Cell cycle) ko04111 (Cell cycle - yeast) map04111 (Cell cycle - yeast) ko04113 (Meiosis - yeast) map04113 (Meiosis - yeast) ko04114 (Oocyte meiosis) map04114 (Oocyte meiosis) ko04120 (Ubiquitin mediated proteolysis) map04120 (Ubiquitin mediated proteolysis)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_018851139.2	cell division cycle 20.2, cofactor of APC complex-like [Juglans regia]	0
TrEMBL	A0A6A1WDV8	Cell division cycle 20.1, cofactor of APC complex OS=Morella rubra OX=262757 GN=CJ030_MR2G024876 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Casuarinaceae	Casuarina equisetifolia	1	Ceq07G1405
Casuarinaceae	Casuarina glauca	1	Cgl07G1489