Basic Information
Locus ID:
Cgl07G0528
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
calcium-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 4765852 | 4766274 | + | Cgl07G0528 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.20 | 15,156.87 Da | 24.04 | 85.79 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 66 | 128 | 2.44051E-18 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 4 | 49 | 2.1E-4 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 65 | 127 | 6.4E-15 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 2 | 128 | 6.22E-34 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 57 | 137 | 5.7E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 1 | 56 | 3.1E-12 | - |
| SMART | SM00054 | efh_1 | 102 | 130 | 1.0E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 66 | 94 | 0.0012 | IPR002048 |
| SMART | SM00054 | efh_1 | 27 | 55 | 0.17 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 98 | 133 | 13.564962 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 62 | 97 | 14.42972 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 23 | 58 | 10.105932 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 36 | 48 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 111 | 123 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 75 | 87 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_041010429.1 | probable calcium-binding protein CML16 [Juglans microcarpa x Juglans regia] | 0 |
| Q9LI84 | Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6QZT6 | Calcium-binding protein CML16 OS=Carpinus fangiana OX=176857 GN=FH972_008791 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology