Basic Information
Locus ID:
Cgl07G0225
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 1820010 | 1821543 | - | Cgl07G0225 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 52,128.44 Da | 52.26 | 64.14 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 25 | 65 | 1.5E-5 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 155 | 199 | 1.9E-4 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 207 | 247 | 2.6E-8 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 19 | 70 | 9.94E-11 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 129 | 306 | 3.66E-35 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 115 | 321 | 3.1E-32 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 77 | 1.5E-7 | - |
| SMART | SM00612 | kelc_smart | 214 | 261 | 3.4E-6 | IPR006652 |
| SMART | SM00612 | kelc_smart | 163 | 212 | 0.11 | IPR006652 |
| SMART | SM00256 | fbox_2 | 27 | 67 | 1.8E-7 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_018811782.2 | F-box/kelch-repeat protein SKIP20-like [Juglans regia] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4DXB7 | F-box/kelch-repeat protein SKIP20-like OS=Juglans regia OX=51240 GN=LOC108984319 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology