Basic Information
Locus ID:
Cgl07G0049
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 366736 | 380350 | + | Cgl07G0049 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 37,423.83 Da | 62.77 | 66.75 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 188 | 328 | 8.49866E-67 | IPR000608 |
| CDD | cd00195 | UBCc | 7 | 145 | 1.93151E-73 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 8 | 144 | 8.5E-52 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 190 | 327 | 3.1E-49 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 1 | 149 | 6.56E-62 | IPR016135 |
| SUPERFAMILY | SSF54495 | UBC-like | 175 | 331 | 4.98E-58 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 177 | 334 | 7.1E-62 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 2 | 150 | 2.6E-67 | IPR016135 |
| SMART | SM00212 | ubc_7 | 189 | 333 | 3.7E-63 | - |
| SMART | SM00212 | ubc_7 | 7 | 150 | 5.1E-69 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 186 | 333 | 54.903049 | IPR000608 |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 4 | 150 | 60.433716 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 260 | 275 | - | IPR023313 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 77 | 92 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 174 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_006842147.1 | ubiquitin-conjugating enzyme E2 2 [Amborella trichopoda] | 0 |
| P42745 | Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5A7Q0D4 | Ubiquitin-conjugating enzyme E2 2 OS=Striga asiatica OX=4170 GN=STAS_15093 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for Cgl07G0049.