Basic Information
Locus ID:
Cgl06G2529
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 28787337 | 28790475 | - | Cgl06G2529 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 86,151.22 Da | 35.01 | 102.66 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 293 | 308 | 1.2 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 511 | 532 | 1.9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 534 | 593 | 1.0E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 415 | 473 | 1.9E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 74 | 3.2E-8 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 257 | 599 | 1.18E-74 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 660 | 759 | 2.41E-12 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 356 | 2.01E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 260 | 364 | 1.5E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 631 | 785 | 5.4E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 154 | 259 | 1.3E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 149 | 5.6E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 365 | 629 | 2.7E-76 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 461 | 484 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 292 | 316 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 436 | 460 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 340 | 364 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 556 | 579 | 85.0 | IPR003591 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 556 | 569 | 7.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 295 | 308 | 7.3E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_041020130.1 | leucine-rich repeat receptor-like protein kinase PXL1 [Juglans microcarpa x Juglans regia] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QS49 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_006381 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg14617 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl24358, Sgl29531 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G2529 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G04505 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr13G013950 |