Basic Information
Locus ID:
Cgl06G2502
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 28444012 | 28449867 | - | Cgl06G2502 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 34,179.53 Da | 47.37 | 81.36 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 20 | 228 | 2.8E-81 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 117 | 220 | 5.98E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 115 | 232 | 3.7E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 121 | 221 | 23.900417 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 90 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_023925917.1 | auxin-responsive protein IAA16 [Quercus suber] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9FZI3 | Auxin-responsive protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20203 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology