Basic Information
Locus ID:
Cgl06G1456
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 15249210 | 15252362 | + | Cgl06G1456 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.56 | 31,131.16 Da | 38.28 | 73.30 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 14 | 234 | 7.1E-82 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 124 | 226 | 7.16E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 121 | 239 | 2.0E-41 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 127 | 227 | 21.10813 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 43 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14550.2 | - | 0 |
| RefSeq | XP_023895683.1 | auxin-induced protein AUX28-like [Quercus suber] | 0 |
| P13089 | Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A1V7N0 | Auxin-responsive protein OS=Morella rubra OX=262757 GN=CJ030_MR6G011288 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology