Basic Information
Locus ID:
Cgl06G1152
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 11458518 | 11463257 | + | Cgl06G1152 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 60,999.62 Da | 49.88 | 54.97 | -1.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | SM01406 | PAPA_1_2 | 450 | 505 | 1.7E-10 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 389 | - | - |
| Coils | Coil | Coil | 442 | 476 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.2 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_030958122.1 | uncharacterized protein LOC115980059 [Quercus lobata] | 0 |
| TrEMBL | A0A2N9ECL7 | PAPA-1 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4649 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology