Basic Information
Locus ID:
Cgl06G1021
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 10037286 | 10037921 | + | Cgl06G1021 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 21,315.23 Da | 52.29 | 81.76 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 77 | 120 | 7.07961E-15 | - |
| Pfam | PF13639 | Ring finger domain | 77 | 120 | 5.0E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 63 | 128 | 5.81E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 38 | 126 | 4.9E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 78 | 119 | 4.0E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 78 | 120 | 12.769585 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 193 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47560.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_035538727.1 | RING-H2 finger protein ATL5-like [Juglans regia] | 0 |
| O22255 | RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6QTJ5 | RING-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_005890 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology