Basic Information
Locus ID:
Cgl06G0692
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
ATP-dependent DNA helicase Q-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 6807914 | 6812952 | + | Cgl06G0692 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 23,076.11 Da | 48.67 | 75.71 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00570 | HRDC domain | 56 | 123 | 6.2E-16 | IPR002121 |
| SUPERFAMILY | SSF47819 | HRDC-like | 54 | 127 | 7.2E-15 | IPR010997 |
| Gene3D | G3DSA:1.10.150.80 | HRDC domain | 48 | 134 | 1.3E-24 | IPR044876 |
| SMART | SM00341 | hrdc7 | 51 | 133 | 1.0E-4 | IPR002121 |
| ProSiteProfiles | PS50967 | HRDC domain profile. | 51 | 133 | 18.429743 | IPR002121 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 157 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10930.1 | DNA helicase (RECQl4A). DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination. | 0 |
| RefSeq | XP_042982000.1 | ATP-dependent DNA helicase Q-like 4A [Carya illinoinensis] | 0 |
| Q8L840 | ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana OX=3702 GN=RECQL4A PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T1QFC6 | DNA helicase OS=Carya illinoinensis OX=32201 GN=CIPAW_05G049800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology