Basic Information
Locus ID:
Cgl06G0644
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Phospholipase D alpha 1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 6382911 | 6393587 | - | Cgl06G0644 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 125,386.85 Da | 39.44 | 84.29 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13091 | PLD-like domain | 842 | 989 | 1.6E-7 | IPR025202 |
| Pfam | PF12357 | Phospholipase D C terminal | 1026 | 1097 | 5.9E-29 | IPR024632 |
| Pfam | PF00566 | Rab-GTPase-TBC domain | 133 | 337 | 2.2E-18 | IPR000195 |
| Pfam | PF00168 | C2 domain | 379 | 463 | 2.8E-9 | IPR000008 |
| Pfam | PF00614 | Phospholipase D Active site motif | 663 | 701 | 3.6E-10 | IPR001736 |
| SUPERFAMILY | SSF47923 | Ypt/Rab-GAP domain of gyp1p | 109 | 320 | 3.14E-31 | IPR035969 |
| SUPERFAMILY | SSF56024 | Phospholipase D/nuclease | 490 | 771 | 6.91E-34 | - |
| SUPERFAMILY | SSF47923 | Ypt/Rab-GAP domain of gyp1p | 298 | 370 | 2.88E-10 | IPR035969 |
| SUPERFAMILY | SSF56024 | Phospholipase D/nuclease | 835 | 1037 | 3.66E-20 | - |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 381 | 486 | 6.55E-14 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 375 | 488 | 1.6E-8 | IPR035892 |
| Gene3D | G3DSA:3.30.870.10 | Endonuclease Chain A | 815 | 996 | 1.6E-12 | - |
| Gene3D | G3DSA:1.10.472.80 | - | 322 | 374 | 3.0E-7 | - |
| Gene3D | G3DSA:3.30.870.10 | Endonuclease Chain A | 539 | 777 | 1.6E-22 | - |
| Gene3D | G3DSA:1.10.8.270 | putative rabgap domain of human tbc1 domain family member 14 like domains | 173 | 288 | 9.8E-13 | - |
| SMART | SM00155 | pld_4 | 953 | 980 | 1.5E-8 | IPR001736 |
| SMART | SM00155 | pld_4 | 663 | 701 | 0.0038 | IPR001736 |
| SMART | SM00164 | tbc_4 | 123 | 374 | 1.4E-5 | IPR000195 |
| SMART | SM00239 | C2_3c | 359 | 461 | 6.5E-6 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 341 | 462 | 10.755472 | IPR000008 |
| ProSiteProfiles | PS50035 | Phospholipase D phosphodiesterase active site profile. | 663 | 701 | 11.594799 | IPR001736 |
| ProSiteProfiles | PS50086 | TBC/rab GAP domain profile. | 128 | 363 | 17.816145 | IPR000195 |
| ProSiteProfiles | PS50035 | Phospholipase D phosphodiesterase active site profile. | 953 | 980 | 15.2604 | IPR001736 |
| Coils | Coil | Coil | 149 | 169 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko00564 (Glycerophospholipid metabolism)
map00564 (Glycerophospholipid metabolism)
ko00565 (Ether lipid metabolism)
map00565 (Ether lipid metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko04014 (Ras signaling pathway)
map04014 (Ras signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04072 (Phospholipase D signaling pathway)
map04072 (Phospholipase D signaling pathway)
map04666 (Fc gamma R-mediated phagocytosis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52570.1 | phospholipase D alpha 2. member of C2-PLD subfamily | 0 |
| RefSeq | XP_023875709.1 | phospholipase D alpha 1-like [Quercus suber] | 0 |
| Q41142 | Phospholipase D alpha 1 OS=Ricinus communis OX=3988 GN=PLD1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9IA72 | phospholipase D OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48831 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology