Basic Information
Locus ID:
Cgl06G0638
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 6321216 | 6324702 | - | Cgl06G0638 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 68,593.82 Da | 43.92 | 107.94 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 562 | 581 | 0.53 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 242 | 264 | 0.0042 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 268 | 290 | 1.3 | IPR001611 |
| Pfam | PF00646 | F-box domain | 66 | 106 | 1.2E-5 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 216 | 239 | 0.29 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 355 | 601 | 6.47E-33 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 63 | 104 | 1.15E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 168 | 417 | 2.08E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 136 | 254 | 1.5E-20 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 66 | 103 | 1.0E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 255 | 447 | 1.8E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 448 | 644 | 4.5E-31 | IPR032675 |
| SMART | SM00256 | fbox_2 | 70 | 110 | 0.0036 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 373 | 398 | 11.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 559 | 583 | 83.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 399 | 424 | 320.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 216 | 241 | 3.5E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 585 | 610 | 63.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 347 | 372 | 0.67 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 190 | 215 | 0.11 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 453 | 478 | 0.39 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 242 | 267 | 1.6E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 611 | 636 | 350.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 506 | 531 | 59.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 533 | 558 | 0.0027 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 268 | 293 | 1.9E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 479 | 504 | 0.11 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_018847203.1 | EIN3-binding F-box protein 1-like [Juglans regia] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QL84 | F-box domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003388 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology