Basic Information
Locus ID:
Cgl06G0417
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 3970703 | 3975769 | + | Cgl06G0417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 41,540.28 Da | 50.50 | 62.12 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 70 | 373 | 7.1E-88 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 258 | 363 | 1.08E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 260 | 375 | 2.4E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 262 | 366 | 25.828642 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 180 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_023921077.1 | auxin-responsive protein IAA9 [Quercus suber] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QWF4 | Auxin-responsive protein OS=Carpinus fangiana OX=176857 GN=FH972_006824 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology