Basic Information
Locus ID:
Cgl06G0172
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 1518230 | 1542875 | - | Cgl06G0172 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 223,162.20 Da | 32.41 | 84.25 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 44 | 309 | 2.12095E-157 | - |
| CDD | cd10810 | GH38N_AMII_LAM_like | 1028 | 1304 | 5.36193E-170 | - |
| Pfam | PF09261 | Alpha mannosidase middle domain | 350 | 441 | 1.2E-17 | IPR015341 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 1029 | 1340 | 2.1E-92 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 1887 | 1991 | 6.6E-11 | IPR041147 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 883 | 988 | 3.4E-12 | IPR041147 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 45 | 345 | 4.4E-81 | IPR000602 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 1345 | 1437 | 6.6E-19 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 1593 | 1805 | 5.7E-50 | IPR011682 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 581 | 801 | 2.1E-48 | IPR011682 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 456 | 989 | 3.92E-130 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 349 | 443 | 6.54E-26 | IPR028995 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 1017 | 1341 | 4.09E-108 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 1344 | 1438 | 4.25E-26 | IPR028995 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 1450 | 1995 | 2.51E-146 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 33 | 346 | 8.89E-100 | IPR011330 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 1388 | 1443 | 5.1E-20 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 393 | 447 | 6.3E-20 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 577 | 849 | 6.8E-99 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 1028 | 1308 | 1.2E-119 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 314 | 392 | 1.0E-29 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 1588 | 1853 | 1.6E-99 | - |
| Gene3D | G3DSA:2.60.40.1360 | - | 869 | 992 | 1.5E-30 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 44 | 313 | 1.4E-107 | IPR027291 |
| Gene3D | G3DSA:2.60.40.1180 | - | 1455 | 1566 | 1.7E-25 | IPR013780 |
| Gene3D | G3DSA:2.60.40.1180 | - | 459 | 548 | 8.5E-15 | IPR013780 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 1309 | 1387 | 3.5E-31 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 1876 | 1995 | 8.6E-33 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 1345 | 1419 | 4.2E-22 | IPR015341 |
| SMART | SM00872 | Alpha_mann_mid_2 | 350 | 423 | 3.9E-20 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_018829558.1 | alpha-mannosidase [Juglans regia] | 0 |
| C0HJB3 | Alpha-mannosidase OS=Canavalia ensiformis OX=3823 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1R3ISJ5 | alpha-mannosidase OS=Corchorus capsularis OX=210143 GN=CCACVL1_10111 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology