Basic Information
Locus ID:
Cgl05G2505
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 28844805 | 28848520 | + | Cgl05G2505 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 66,949.50 Da | 36.32 | 86.52 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 298 | 385 | 1.02808E-20 | - |
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 557 | 603 | 4.0E-7 | IPR021820 |
| Pfam | PF00954 | S-locus glycoprotein domain | 219 | 289 | 1.6E-8 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 77 | 162 | 1.0E-22 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 307 | 366 | 2.2E-12 | IPR003609 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 459 | 507 | 8.29E-6 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 72 | 204 | 2.22E-21 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 27 | 146 | 1.8E-13 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 462 | 529 | 3.7E-7 | - |
| SMART | SM00473 | ntp_6 | 308 | 384 | 3.1E-9 | IPR003609 |
| SMART | SM00108 | blect_4 | 30 | 148 | 1.8E-14 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 30 | 146 | 12.594123 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 302 | 385 | 9.2164 | IPR003609 |
| ProSitePatterns | PS01186 | EGF-like domain signature 2. | 281 | 294 | - | IPR000742 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11350.1 | S-domain-1 13. | 0 |
| RefSeq | XP_018812365.1 | receptor-like serine/threonine-protein kinase SD1-6 isoform X1 [Juglans regia] | 0 |
| Q9LPZ9 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana OX=3702 GN=SD113 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2I4DYZ0 | Receptor-like serine/threonine-protein kinase OS=Juglans regia OX=51240 GN=LOC108984766 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30129710, pistato.v30160120 |
| Casuarinaceae | Casuarina equisetifolia | 14 | Ceq01G1391, Ceq01G1393, Ceq01G1394, Ceq01G1396, Ceq01G1397 ... |
| Casuarinaceae | Casuarina glauca | 25 | Cgl01G1556, Cgl01G1558, Cgl01G1559, Cgl01G1561, Cgl01G1566 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1050 |
| Poaceae | Triticum aestivum | 1 | TraesCS2A02G535100.1 |