Basic Information
Locus ID:
Cgl05G2142
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 24193996 | 24197453 | + | Cgl05G2142 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 91,145.69 Da | 37.58 | 91.55 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 300 | 385 | 6.27672E-20 | - |
| CDD | cd00028 | B_lectin | 35 | 147 | 9.45871E-19 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 497 | 761 | 1.76964E-86 | - |
| Pfam | PF01453 | D-mannose binding lectin | 76 | 170 | 2.7E-19 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 218 | 288 | 7.0E-7 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 493 | 694 | 3.7E-47 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 307 | 365 | 7.6E-13 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 71 | 203 | 1.31E-18 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 475 | 783 | 1.48E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 454 | 566 | 3.7E-35 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 23 | 144 | 4.0E-13 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 567 | 768 | 2.1E-57 | - |
| SMART | SM00473 | ntp_6 | 308 | 384 | 2.6E-11 | IPR003609 |
| SMART | SM00220 | serkin_6 | 491 | 754 | 2.8E-37 | IPR000719 |
| SMART | SM00108 | blect_4 | 34 | 147 | 1.9E-9 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 1 | 809 | 1.1E-215 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 302 | 385 | 10.307525 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 491 | 776 | 38.336369 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 28 | 145 | 11.430461 | IPR001480 |
| ProSitePatterns | PS01186 | EGF-like domain signature 2. | 281 | 294 | - | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 612 | 624 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65790.1 | receptor kinase 1. An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain. | 0 |
| RefSeq | XP_018812365.1 | receptor-like serine/threonine-protein kinase SD1-6 isoform X1 [Juglans regia] | 0 |
| Q39086 | Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana OX=3702 GN=SD17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4DYZ0 | Receptor-like serine/threonine-protein kinase OS=Juglans regia OX=51240 GN=LOC108984766 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30129710, pistato.v30160120 |
| Casuarinaceae | Casuarina equisetifolia | 14 | Ceq01G1391, Ceq01G1393, Ceq01G1394, Ceq01G1396, Ceq01G1397 ... |
| Casuarinaceae | Casuarina glauca | 25 | Cgl01G1556, Cgl01G1558, Cgl01G1559, Cgl01G1561, Cgl01G1566 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1050 |
| Poaceae | Triticum aestivum | 1 | TraesCS2A02G535100.1 |