Basic Information
Locus ID:
Cgl05G2136
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 24116593 | 24117664 | + | Cgl05G2136 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 32,154.58 Da | 34.26 | 97.88 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 35 | 146 | 2.17986E-17 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 75 | 169 | 6.4E-19 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 73 | 202 | 9.36E-20 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 23 | 143 | 2.3E-14 | IPR036426 |
| SMART | SM00108 | blect_4 | 34 | 146 | 3.5E-7 | IPR001480 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 26 | 5.0 | - |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 28 | 144 | 13.27186 | IPR001480 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_018812365.1 | receptor-like serine/threonine-protein kinase SD1-6 isoform X1 [Juglans regia] | 0 |
| TrEMBL | A0A5N6RW48 | Bulb-type lectin domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_020250 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30129710, pistato.v30160120 |
| Casuarinaceae | Casuarina equisetifolia | 14 | Ceq01G1391, Ceq01G1393, Ceq01G1394, Ceq01G1396, Ceq01G1397 ... |
| Casuarinaceae | Casuarina glauca | 25 | Cgl01G1556, Cgl01G1558, Cgl01G1559, Cgl01G1561, Cgl01G1566 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1050 |
| Poaceae | Triticum aestivum | 1 | TraesCS2A02G535100.1 |