Basic Information
Locus ID:
Cgl05G2129
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 23993644 | 23997332 | + | Cgl05G2129 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 89,755.98 Da | 38.46 | 93.61 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 28 | 146 | 3.74177E-17 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 298 | 383 | 1.2878E-17 | - |
| CDD | cd14066 | STKc_IRAK | 495 | 759 | 5.1707E-89 | - |
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 761 | 807 | 4.3E-7 | IPR021820 |
| Pfam | PF00069 | Protein kinase domain | 492 | 692 | 1.5E-46 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 306 | 362 | 1.4E-11 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 75 | 160 | 1.5E-20 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 73 | 202 | 4.32E-20 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 472 | 776 | 4.05E-81 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 23 | 143 | 2.5E-15 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 565 | 771 | 4.5E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 463 | 564 | 5.6E-35 | - |
| SMART | SM00473 | ntp_6 | 306 | 382 | 3.8E-7 | IPR003609 |
| SMART | SM00220 | serkin_6 | 489 | 752 | 1.8E-35 | IPR000719 |
| SMART | SM00108 | blect_4 | 28 | 146 | 7.8E-11 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 1 | 807 | 9.8E-215 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 489 | 766 | 38.477707 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 28 | 144 | 12.721998 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 300 | 383 | 9.307327 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 610 | 622 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11350.1 | S-domain-1 13. | 0 |
| RefSeq | XP_018812365.1 | receptor-like serine/threonine-protein kinase SD1-6 isoform X1 [Juglans regia] | 0 |
| Q9LPZ9 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana OX=3702 GN=SD113 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2I4DYZ0 | Receptor-like serine/threonine-protein kinase OS=Juglans regia OX=51240 GN=LOC108984766 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30129710, pistato.v30160120 |
| Casuarinaceae | Casuarina equisetifolia | 14 | Ceq01G1391, Ceq01G1393, Ceq01G1394, Ceq01G1396, Ceq01G1397 ... |
| Casuarinaceae | Casuarina glauca | 25 | Cgl01G1556, Cgl01G1558, Cgl01G1559, Cgl01G1561, Cgl01G1566 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1050 |
| Poaceae | Triticum aestivum | 1 | TraesCS2A02G535100.1 |