Basic Information
Locus ID:
Cgl05G2119
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 23922549 | 23928859 | + | Cgl05G2119 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 89,405.37 Da | 33.64 | 93.45 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 301 | 385 | 1.43662E-18 | - |
| CDD | cd00028 | B_lectin | 35 | 147 | 6.01378E-18 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 76 | 170 | 4.9E-19 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 493 | 687 | 1.1E-40 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 308 | 368 | 8.2E-14 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 218 | 289 | 2.6E-7 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 476 | 766 | 1.75E-72 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 65 | 202 | 1.05E-17 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 23 | 144 | 2.5E-13 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 568 | 757 | 1.4E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 467 | 567 | 5.6E-33 | - |
| SMART | SM00108 | blect_4 | 28 | 147 | 1.1E-9 | IPR001480 |
| SMART | SM00220 | serkin_6 | 492 | 742 | 2.7E-29 | IPR000719 |
| SMART | SM00473 | ntp_6 | 309 | 385 | 1.7E-9 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 1 | 798 | 1.1E-201 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 28 | 145 | 11.136348 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 492 | 755 | 33.163326 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 303 | 386 | 10.186289 | IPR003609 |
| ProSitePatterns | PS01186 | EGF-like domain signature 2. | 282 | 295 | - | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 601 | 613 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65790.1 | receptor kinase 1. An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain. | 0 |
| RefSeq | XP_050247311.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 isoform X1 [Quercus robur] | 0 |
| Q39086 | Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana OX=3702 GN=SD17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4DYZ0 | Receptor-like serine/threonine-protein kinase OS=Juglans regia OX=51240 GN=LOC108984766 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30129710, pistato.v30160120 |
| Casuarinaceae | Casuarina equisetifolia | 14 | Ceq01G1391, Ceq01G1393, Ceq01G1394, Ceq01G1396, Ceq01G1397 ... |
| Casuarinaceae | Casuarina glauca | 25 | Cgl01G1556, Cgl01G1558, Cgl01G1559, Cgl01G1561, Cgl01G1566 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1050 |
| Poaceae | Triticum aestivum | 1 | TraesCS2A02G535100.1 |