Basic Information
Locus ID:
Cgl05G1768
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 19478545 | 19484211 | + | Cgl05G1768 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.90 | 72,152.98 Da | 42.07 | 80.34 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 77 | 287 | 3.5E-83 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 327 | 557 | 3.3E-62 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 86 | 558 | 3.2E-226 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 345 | 521 | 3.2E-226 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 643 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_042955136.1 | proteinaceous RNase P 2-like [Carya illinoinensis] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T1NR48 | Ribonuclease P OS=Carya illinoinensis OX=32201 GN=CIPAW_13G138200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology