HalophFGD

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Basic Information
Locus ID: Cgl05G1649
Species & Taxonomic ID: Casuarina glauca & 3522
Genome Assembly: GCA_028551395.1
Description: F-box kelch-repeat protein At3g06240-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr05 17739371 17740800 + Cgl05G1649
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.43 39,305.72 Da 36.33 93.85 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08268 F-box associated domain 202 304 5.1E-12 IPR013187
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 93 304 3.0E-29 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_050248965.1 F-box protein At3g07870-like [Quercus robur] 0
TrEMBL A0A7N2MBC4 F-box domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Apiaceae Apium graveolens 10 Ag2G00504, Ag2G01353, Ag5G02626, Ag5G02641, Ag6G00433 ...
Ag7G01472, Ag9G01465, AgUnG00605, AgUnG01234, AgUnG01425
Asparagaceae Asparagus officinalis 1 AsparagusV1_02.88.V1.1
Asteraceae Flaveria trinervia 9 Ftri17G03779, Ftri17G11594, Ftri17G14448, Ftri17G18365 ...
Ftri17G21512, Ftri17G26292, Ftri17G26949, Ftri17G27622, Ftri7G18648
Casuarinaceae Casuarina glauca 1 Cgl05G1649
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.