Basic Information
Locus ID:
Cgl05G1628
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 17376913 | 17385916 | + | Cgl05G1628 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.73 | 94,356.23 Da | 54.75 | 70.00 | -0.88 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 776 | 821 | 6.5E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 764 | 828 | 3.9E-9 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 778 | 816 | 9.863244 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 656 | 670 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 679 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 359 | - | - |
| Coils | Coil | Coil | 708 | 745 | - | - |
| Coils | Coil | Coil | 350 | 370 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27950.1 | Ring/U-Box superfamily protein. | 0 |
| RefSeq | XP_030958470.1 | uncharacterized protein LOC115980344 [Quercus lobata] | 0 |
| TrEMBL | A0A660KNZ5 | RING-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_010135 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology