Basic Information
Locus ID:
Cgl05G1611
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 16921498 | 16942173 | + | Cgl05G1611 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 98,424.18 Da | 51.23 | 74.44 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 51 | 140 | 8.27048E-11 | - |
| CDD | cd00159 | RhoGAP | 201 | 340 | 1.1511E-32 | - |
| Pfam | PF00169 | PH domain | 55 | 144 | 1.9E-11 | IPR001849 |
| Pfam | PF00620 | RhoGAP domain | 201 | 345 | 1.6E-31 | IPR000198 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 641 | 721 | 1.2E-21 | IPR025757 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 201 | 394 | 1.96E-34 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 53 | 149 | 6.3E-15 | - |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 170 | 394 | 2.0E-41 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 46 | 154 | 2.7E-13 | IPR011993 |
| SMART | SM00233 | PH_update | 35 | 147 | 3.5E-9 | IPR001849 |
| SMART | SM00324 | RhoGAP_3 | 198 | 389 | 7.2E-29 | IPR000198 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 192 | 392 | 29.794184 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 55 | 145 | 12.1892 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 450 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 559 | 600 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 594 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 498 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 791 | 813 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 520 | - | - |
| Coils | Coil | Coil | 843 | 870 | - | - |
| Coils | Coil | Coil | 690 | 724 | - | - |
| Coils | Coil | Coil | 599 | 626 | - | - |
| Coils | Coil | Coil | 631 | 665 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_018825484.2 | rho GTPase-activating protein 7-like [Juglans regia] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A660KP94 | Rho GTPase-activating protein 7-like OS=Carpinus fangiana OX=176857 GN=FH972_009859 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology