Basic Information
Locus ID:
Cgl05G1543
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 15830844 | 15845051 | - | Cgl05G1543 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 97,837.67 Da | 42.21 | 84.71 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 717 | 867 | 1.31603E-53 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 275 | 866 | 3.3E-81 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 273 | 869 | 6.87E-105 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 653 | 871 | 4.9E-54 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 262 | 476 | 3.7E-66 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 275 | 869 | 55.195465 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 812 | 829 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 276 | 291 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_050285084.1 | ubiquitin carboxyl-terminal hydrolase 8 isoform X2 [Quercus robur] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A660KMM2 | Ubiquitin carboxyl-terminal hydrolase OS=Carpinus fangiana OX=176857 GN=FH972_010206 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology