Basic Information
Locus ID:
Cgl05G1524
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 15580267 | 15601285 | + | Cgl05G1524 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 132,663.59 Da | 42.92 | 79.34 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 70 | 193 | 2.01329E-40 | IPR002083 |
| CDD | cd02659 | peptidase_C19C | 211 | 539 | 9.35685E-168 | - |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 900 | 1110 | 3.6E-55 | IPR029346 |
| Pfam | PF00917 | MATH domain | 76 | 194 | 5.0E-19 | IPR002083 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 213 | 534 | 6.0E-45 | IPR001394 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 638 | 890 | 8.6E-76 | IPR024729 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 208 | 565 | 9.22E-98 | IPR038765 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 66 | 200 | 9.16E-41 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 210 | 538 | 3.2E-89 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 816 | 913 | 9.2E-26 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 67 | 209 | 1.0E-52 | IPR008974 |
| Gene3D | G3DSA:3.10.20.90 | - | 698 | 815 | 1.3E-43 | - |
| SMART | SM00061 | math_3 | 70 | 174 | 2.2E-18 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 213 | 537 | 40.131878 | IPR028889 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 68 | 193 | 38.928833 | IPR002083 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 453 | 470 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 214 | 229 | - | IPR018200 |
| Coils | Coil | Coil | 546 | 577 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G11910.1 | ubiquitin-specific protease 13. | 0 |
| RefSeq | XP_030960429.1 | ubiquitin carboxyl-terminal hydrolase 12-like [Quercus lobata] | 0 |
| Q84WU2 | Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7N2KMU4 | ubiquitinyl hydrolase 1 OS=Quercus lobata OX=97700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology